A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv469860



Internal ID15534575
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:80633677..80790180hg38UCSC Ensembl
Innerchr10:82393433..82549936hg19UCSC Ensembl
Innerchr10:82383413..82539916hg18UCSC Ensembl
Innerchr10:82058010..82214513hg16UCSC Ensembl
Cytoband10q23.1
Allele length
AssemblyAllele length
hg38156504
hg19156504
hg18156504
hg16156504
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1673239, nssv1672939, nssv1673364, nssv1675692, nssv1674455, nssv1675529, nssv1672642, nssv1675917, nssv1674600, nssv1673527, nssv1675927, nssv1674367, nssv1676436, nssv1676570, nssv1673384, nssv1672352, nssv1672558, nssv1674501, nssv1673341, nssv1676314
Samples
Known GenesSH2D4B
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)nsv469860
Frequency
Sample Size265
Observed Gain18
Observed Loss2
Observed Complex0
Frequencyn/a


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