Variant Details

Variant: nsv469833

Internal ID

15187862

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr20:447851..614798	hg38	UCSC Ensembl
Inner	chr20:428495..595442	hg19	UCSC Ensembl
Inner	chr20:376495..543442	hg18	UCSC Ensembl
Inner	chr20:423495..590442	hg16	UCSC Ensembl

Cytoband

20p13

Allele length

Assembly	Allele length
hg38	166948
hg19	166948
hg18	166948
hg16	166948

Variant Type

CNV gain

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

nssv1673904, nssv1672164, nssv1675313, nssv1676380, nssv1676100, nssv1672312, nssv1673007, nssv1673734

Samples

Known Genes

CSNK2A1, TBC1D20, TCF15

Method

BAC aCGH

Analysis

A locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.

Platform

GPL4010

Comments

Reference

Locke_et_al_2006

Pubmed ID

16826518

Accession Number(s)

nsv469833

Frequency

Sample Size	265
Observed Gain	8
Observed Loss	0
Observed Complex	0
Frequency	n/a