A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv469830



Internal ID8501527
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:12039669..12199858hg38UCSC Ensembl
Innerchr1:12099726..12259915hg19UCSC Ensembl
Innerchr1:12022313..12182502hg18UCSC Ensembl
Innerchr1:11809272..11969461hg16UCSC Ensembl
Cytoband1p36.22
Allele length
AssemblyAllele length
hg38160190
hg19160190
hg18160190
hg16160190
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1674860
Samples
Known GenesMIR4632, MIR7846, TNFRSF1B, TNFRSF8
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)nsv469830
Frequency
Sample Size265
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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