A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv469828



Internal ID15534543
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrY:25500014..25647577hg38UCSC Ensembl
InnerchrY:27646161..27793724hg19UCSC Ensembl
InnerchrY:26055549..26203112hg18UCSC Ensembl
InnerchrY:26502195..26649758hg16UCSC Ensembl
CytobandYq11.23
Allele length
AssemblyAllele length
hg38147564
hg19147564
hg18147564
hg16147564
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1674235, nssv1675100, nssv1676241, nssv1673488, nssv1674114, nssv1674924, nssv1672194, nssv1675628, nssv1672829, nssv1676143
Samples
Known GenesCDY1, CDY1B
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)nsv469828
Frequency
Sample Size265
Observed Gain6
Observed Loss4
Observed Complex0
Frequencyn/a


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