A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv469824



Internal ID15187853
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:100759595..100934123hg38UCSC Ensembl
Innerchr15:101299800..101474328hg19UCSC Ensembl
Innerchr15:99117323..99291851hg18UCSC Ensembl
Innerchr15:99035064..99209592hg16UCSC Ensembl
Cytoband15q26.3
Allele length
AssemblyAllele length
hg38174529
hg19174529
hg18174529
hg16174529
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1675201, nssv1676644, nssv1674627
Samples
Known GenesALDH1A3, LRRK1
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)nsv469824
Frequency
Sample Size265
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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