A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv469699



Internal ID15187728
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:82420178..82538962hg38UCSC Ensembl
Innerchr15:83088908..83207713hg19UCSC Ensembl
Innerchr15:80885963..81004768hg18UCSC Ensembl
Innerchr15:80814727..80933532hg16UCSC Ensembl
Cytoband15q25.2
Allele length
AssemblyAllele length
hg38118785
hg19118806
hg18118806
hg16118806
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1676408, nssv1673340, nssv1672287
Samples
Known GenesCSPG4P8, GOLGA6L20, GOLGA6L9, LOC727751, LOC80154, RPS17, RPS17L
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)nsv469699
Frequency
Sample Size265
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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