A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv469609



Internal ID15534324
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr17:3115151..3256571hg38UCSC Ensembl
Innerchr17:3018445..3159865hg19UCSC Ensembl
Innerchr17:2965195..3106615hg18UCSC Ensembl
Innerchr17:3225036..3366456hg16UCSC Ensembl
Cytoband17p13.3
Allele length
AssemblyAllele length
hg38141421
hg19141421
hg18141421
hg16141421
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv4n29
Supporting Variantsnssv1675747, nssv1674298, nssv1675562, nssv1676535, nssv1676411, nssv1673675, nssv1674481, nssv1675219, nssv1673220, nssv1673925
Samples
Known GenesOR1A1, OR1A2, OR1D4, OR1G1
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)nsv469609
Frequency
Sample Size265
Observed Gain0
Observed Loss10
Observed Complex0
Frequencyn/a


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