A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv469587



Internal ID15187616
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:32529739..32694378hg38UCSC Ensembl
Innerchr15:32821940..32986579hg19UCSC Ensembl
Innerchr15:30609232..30773871hg18UCSC Ensembl
Innerchr15:30537996..30702635hg16UCSC Ensembl
Cytoband15q13.3
Allele length
AssemblyAllele length
hg38164640
hg19164640
hg18164640
hg16164640
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1673914, nssv1672998, nssv1676048, nssv1673523, nssv1672777
Samples
Known GenesARHGAP11A, GOLGA8R, LOC100996255, SCG5, WHAMMP1
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)nsv469587
Frequency
Sample Size265
Observed Gain0
Observed Loss5
Observed Complex0
Frequencyn/a


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