A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv469547



Internal ID15187576
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:34302356..34465606hg38UCSC Ensembl
Innerchr15:34594557..34757807hg19UCSC Ensembl
Innerchr15:32381849..32545099hg18UCSC Ensembl
Innerchr15:32310613..32473863hg16UCSC Ensembl
Cytoband15q14
Allele length
AssemblyAllele length
hg38163251
hg19163251
hg18163251
hg16163251
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1674844, nssv1673217, nssv1674204, nssv1674723, nssv1672752, nssv1675970, nssv1673613, nssv1675588, nssv1676112, nssv1673832, nssv1672535, nssv1675151, nssv1675234, nssv1672716, nssv1672405, nssv1674519, nssv1673745, nssv1674155, nssv1672159, nssv1674292, nssv1676220, nssv1675743, nssv1673720, nssv1674776, nssv1672674, nssv1674424, nssv1675539, nssv1672424, nssv1674291, nssv1674138, nssv1672880, nssv1675742, nssv1676381, nssv1674672
Samples
Known GenesGOLGA8A, LPCAT4, MIR1233-1, MIR1233-2, NOP10, NUTM1, SLC12A6
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)nsv469547
Frequency
Sample Size265
Observed Gain0
Observed Loss34
Observed Complex0
Frequencyn/a


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