A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv468870



Internal ID15182249
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:113038133..113080060hg38UCSC Ensembl
Innerchr11:112908855..112950782hg19UCSC Ensembl
Innerchr11:112414065..112455992hg18UCSC Ensembl
Innerchr11:112414065..112455992hg17UCSC Ensembl
Cytoband11q23.1
Allele length
AssemblyAllele length
hg3841928
hg1941928
hg1841928
hg1741928
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv543929
SamplesNINDS_69
Known GenesNCAM1
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv468870
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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