A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv467862



Internal ID15527927
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:38868581..38987021hg38UCSC Ensembl
Innerchr11:38890131..39008571hg19UCSC Ensembl
Innerchr11:38846707..38965147hg18UCSC Ensembl
Innerchr11:38846707..38965147hg17UCSC Ensembl
Cytoband11p12
Allele length
AssemblyAllele length
hg38118441
hg19118441
hg18118441
hg17118441
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv543003
Samples1780854196_A
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv467862
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer