A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv467833



Internal ID15527898
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:38230635..38292703hg38UCSC Ensembl
Innerchr11:38252185..38314253hg19UCSC Ensembl
Innerchr11:38208761..38270829hg18UCSC Ensembl
Innerchr11:38208761..38270829hg17UCSC Ensembl
Cytoband11p12
Allele length
AssemblyAllele length
hg3862069
hg1962069
hg1862069
hg1762069
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv138n27
Supporting Variantsnssv542991
Samples1780862547_A
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv467833
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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