A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv467825



Internal ID15527890
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:38227656..38318734hg38UCSC Ensembl
Innerchr11:38249206..38340284hg19UCSC Ensembl
Innerchr11:38205782..38296860hg18UCSC Ensembl
Innerchr11:38205782..38296860hg17UCSC Ensembl
Cytoband11p12
Allele length
AssemblyAllele length
hg3891079
hg1991079
hg1891079
hg1791079
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv542989
Samples1782681169_A
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv467825
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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