A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv467799



Internal ID15527864
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:37929110..37985098hg38UCSC Ensembl
Innerchr11:37950660..38006648hg19UCSC Ensembl
Innerchr11:37907236..37963224hg18UCSC Ensembl
Innerchr11:37907236..37963224hg17UCSC Ensembl
Cytoband11p12
Allele length
AssemblyAllele length
hg3855989
hg1955989
hg1855989
hg1755989
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv542982
Samples1798860114_A
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv467799
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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