A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv467774



Internal ID15527839
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:25751775..25903262hg38UCSC Ensembl
Innerchr11:25773322..25924809hg19UCSC Ensembl
Innerchr11:25729898..25881385hg18UCSC Ensembl
Innerchr11:25729898..25881385hg17UCSC Ensembl
Cytoband11p14.3
Allele length
AssemblyAllele length
hg38151488
hg19151488
hg18151488
hg17151488
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv542965
SamplesHGDP00869
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv467774
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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