A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv467514



Internal ID15180893
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:133404452..133556028hg38UCSC Ensembl
Innerchr10:135217956..135369532hg19UCSC Ensembl
Innerchr10:135067946..135219522hg18UCSC Ensembl
Innerchr10:135106837..135258413hg17UCSC Ensembl
Cytoband10q26.3
Allele length
AssemblyAllele length
hg38151577
hg19151577
hg18151577
hg17151577
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv125n27
Supporting Variantsnssv542790
SamplesHGDP00881
Known GenesCYP2E1, MTG1, SCART1, SPRN, SYCE1
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv467514
Frequency
Sample Size1557
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer