A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv467486



Internal ID15527551
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:130771908..130800011hg38UCSC Ensembl
Innerchr10:132570172..132598275hg19UCSC Ensembl
Innerchr10:132460162..132488265hg18UCSC Ensembl
Innerchr10:132460162..132488265hg17UCSC Ensembl
Cytoband10q26.3
Allele length
AssemblyAllele length
hg3828104
hg1928104
hg1828104
hg1728104
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv542769
SamplesNINDS_65
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv467486
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer