A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv467434



Internal ID15527499
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:92908767..92965751hg38UCSC Ensembl
Innerchr10:94668524..94725508hg19UCSC Ensembl
Innerchr10:94658504..94715488hg18UCSC Ensembl
Innerchr10:94658504..94715488hg17UCSC Ensembl
Cytoband10q23.33
Allele length
AssemblyAllele length
hg3856985
hg1956985
hg1856985
hg1756985
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv542727
SamplesHGDP00150
Known GenesEXOC6
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv467434
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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