A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv467385



Internal ID15527450
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:78507242..78552650hg38UCSC Ensembl
Innerchr10:80266999..80312407hg19UCSC Ensembl
Innerchr10:79937005..79982413hg18UCSC Ensembl
Innerchr10:79937005..79982413hg17UCSC Ensembl
Cytoband10q22.3
Allele length
AssemblyAllele length
hg3845409
hg1945409
hg1845409
hg1745409
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv113n27
Supporting Variantsnssv542695
SamplesHGDP00788
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv467385
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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