A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv466870



Internal ID15180249
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:35011695..35049771hg38UCSC Ensembl
Innerchr10:35300623..35338699hg19UCSC Ensembl
Innerchr10:35340629..35378705hg18UCSC Ensembl
Innerchr10:35340629..35378705hg17UCSC Ensembl
Cytoband10p11.21
Allele length
AssemblyAllele length
hg3838077
hg1938077
hg1838077
hg1738077
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv542323
Samples1780854255_A
Known GenesCUL2
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv466870
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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