A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv466857



Internal ID15526922
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:29956632..29976164hg38UCSC Ensembl
Innerchr10:30245561..30265093hg19UCSC Ensembl
Innerchr10:30285567..30305099hg18UCSC Ensembl
Innerchr10:30285567..30305099hg17UCSC Ensembl
Cytoband10p11.23
Allele length
AssemblyAllele length
hg3819533
hg1919533
hg1819533
hg1719533
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv542312
Samples1780854097_A
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv466857
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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