A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv466837



Internal ID15526902
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:26569931..26577491hg38UCSC Ensembl
Innerchr10:26858860..26866420hg19UCSC Ensembl
Innerchr10:26898866..26906426hg18UCSC Ensembl
Innerchr10:26898866..26906426hg17UCSC Ensembl
Cytoband10p12.1
Allele length
AssemblyAllele length
hg387561
hg197561
hg187561
hg177561
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv542298
Samples1780862093_A
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv466837
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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