A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv466756



Internal ID15180135
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:15351310..15415762hg38UCSC Ensembl
Innerchr10:15393309..15457761hg19UCSC Ensembl
Innerchr10:15433315..15497767hg18UCSC Ensembl
Innerchr10:15433315..15497767hg17UCSC Ensembl
Cytoband10p13
Allele length
AssemblyAllele length
hg3864453
hg1964453
hg1864453
hg1764453
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv542223
Samples1780862093_A
Known GenesFAM171A1
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv466756
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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