A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv466715



Internal ID15526780
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:5243634..5355228hg38UCSC Ensembl
Innerchr10:5285597..5397191hg19UCSC Ensembl
Innerchr10:5275597..5387191hg18UCSC Ensembl
Innerchr10:5275597..5387191hg17UCSC Ensembl
Cytoband10p15.1
Allele length
AssemblyAllele length
hg38111595
hg19111595
hg18111595
hg17111595
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv65n27
Supporting Variantsnssv542191
SamplesHGDP00672
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv466715
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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