A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv466638



Internal ID15526703
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:134552050..134594030hg38UCSC Ensembl
Innerchr9:137443896..137485876hg19UCSC Ensembl
Innerchr9:136583717..136625697hg18UCSC Ensembl
Innerchr9:134669841..134711821hg17UCSC Ensembl
Cytoband9q34.2
Allele length
AssemblyAllele length
hg3841981
hg1941981
hg1841981
hg1741981
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv542138
SamplesHGDP01268
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv466638
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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