A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv466633



Internal ID15526698
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:134290253..134351537hg38UCSC Ensembl
Innerchr9:137182099..137243383hg19UCSC Ensembl
Innerchr9:136321920..136383204hg18UCSC Ensembl
Innerchr9:134361653..134422937hg17UCSC Ensembl
Cytoband9q34.2
Allele length
AssemblyAllele length
hg3861285
hg1961285
hg1861285
hg1761285
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv542133
Samples1780862444_A
Known GenesRXRA
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv466633
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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