A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv466586



Internal ID15526651
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:129396337..129415934hg38UCSC Ensembl
Innerchr9:132158616..132178213hg19UCSC Ensembl
Innerchr9:131198437..131218034hg18UCSC Ensembl
Innerchr9:129238170..129257767hg17UCSC Ensembl
Cytoband9q34.11
Allele length
AssemblyAllele length
hg3819598
hg1919598
hg1819598
hg1719598
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv542097
SamplesNINDS_71
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv466586
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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