A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv466433



Internal ID15526498
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:89646949..89675959hg38UCSC Ensembl
Innerchr9:92261864..92290874hg19UCSC Ensembl
Innerchr9:91451684..91480694hg18UCSC Ensembl
Innerchr9:89491418..89520428hg17UCSC Ensembl
Cytoband9q22.2
Allele length
AssemblyAllele length
hg3829011
hg1929011
hg1829011
hg1729011
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv541979
Samples1780862093_A
Known GenesUNQ6494
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv466433
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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