A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv466432



Internal ID15526497
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:88428330..88494583hg38UCSC Ensembl
Innerchr9:91043245..91109498hg19UCSC Ensembl
Innerchr9:90233065..90299318hg18UCSC Ensembl
Innerchr9:88272799..88339052hg17UCSC Ensembl
Cytoband9q22.1
Allele length
AssemblyAllele length
hg3866254
hg1966254
hg1866254
hg1766254
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv541978
SamplesHGDP01329
Known GenesSPIN1
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv466432
Frequency
Sample Size1557
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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