A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv466423



Internal ID15526488
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:77039041..77072900hg38UCSC Ensembl
Innerchr9:79653957..79687816hg19UCSC Ensembl
Innerchr9:78843777..78877636hg18UCSC Ensembl
Innerchr9:76883511..76917370hg17UCSC Ensembl
Cytoband9q21.13
Allele length
AssemblyAllele length
hg3833860
hg1933860
hg1833860
hg1733860
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv541971
Samples1780862311_A
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv466423
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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