A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv466390



Internal ID15179769
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:37058138..37289935hg38UCSC Ensembl
Innerchr9:37058135..37289932hg19UCSC Ensembl
Innerchr9:37048135..37279932hg18UCSC Ensembl
Innerchr9:37048135..37279932hg17UCSC Ensembl
Cytoband9p13.2
Allele length
AssemblyAllele length
hg38231798
hg19231798
hg18231798
hg17231798
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv541944
Samples1780854231_A
Known GenesLOC100506710, ZCCHC7
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv466390
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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