A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv466360



Internal ID15526425
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:29556579..29591711hg38UCSC Ensembl
Innerchr9:29556577..29591709hg19UCSC Ensembl
Innerchr9:29546577..29581709hg18UCSC Ensembl
Innerchr9:29546577..29581709hg17UCSC Ensembl
Cytoband9p21.1
Allele length
AssemblyAllele length
hg3835133
hg1935133
hg1835133
hg1735133
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv541920
SamplesNINDS_189
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv466360
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer