A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv466341



Internal ID15526406
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:27845762..27897126hg38UCSC Ensembl
Innerchr9:27845760..27897124hg19UCSC Ensembl
Innerchr9:27835760..27887124hg18UCSC Ensembl
Innerchr9:27835760..27887124hg17UCSC Ensembl
Cytoband9p21.2
Allele length
AssemblyAllele length
hg3851365
hg1951365
hg1851365
hg1751365
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv933n27
Supporting Variantsnssv541912
SamplesHGDP00843
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv466341
Frequency
Sample Size1557
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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