A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv466324



Internal ID15526389
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:26005489..26112750hg38UCSC Ensembl
Innerchr9:26005487..26112748hg19UCSC Ensembl
Innerchr9:25995487..26102748hg18UCSC Ensembl
Innerchr9:25995487..26102748hg17UCSC Ensembl
Cytoband9p21.2
Allele length
AssemblyAllele length
hg38107262
hg19107262
hg18107262
hg17107262
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv541900
SamplesNINDS_79
Known GenesLOC100506422
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv466324
Frequency
Sample Size1557
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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