A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv466303



Internal ID15526368
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:24205006..24335843hg38UCSC Ensembl
Innerchr9:24205004..24335841hg19UCSC Ensembl
Innerchr9:24195004..24325841hg18UCSC Ensembl
Innerchr9:24195004..24325841hg17UCSC Ensembl
Cytoband9p21.3
Allele length
AssemblyAllele length
hg38130838
hg19130838
hg18130838
hg17130838
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv541886
Samples1782681169_A
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv466303
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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