A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv466183



Internal ID15526248
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:11305052..11561438hg38UCSC Ensembl
Innerchr9:11305052..11561438hg19UCSC Ensembl
Innerchr9:11295052..11551438hg18UCSC Ensembl
Innerchr9:11295052..11551438hg17UCSC Ensembl
Cytoband9p23
Allele length
AssemblyAllele length
hg38256387
hg19256387
hg18256387
hg17256387
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv541798
Samples1780854455_A
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv466183
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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