A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv466170



Internal ID15526235
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:10785491..10856892hg38UCSC Ensembl
Innerchr9:10785491..10856892hg19UCSC Ensembl
Innerchr9:10775491..10846892hg18UCSC Ensembl
Innerchr9:10775491..10846892hg17UCSC Ensembl
Cytoband9p23
Allele length
AssemblyAllele length
hg3871402
hg1971402
hg1871402
hg1771402
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv541785
Samples1780862309_A
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv466170
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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