A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv466155



Internal ID15526220
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:9989765..10091133hg38UCSC Ensembl
Innerchr9:9989765..10091133hg19UCSC Ensembl
Innerchr9:9979765..10081133hg18UCSC Ensembl
Innerchr9:9979765..10081133hg17UCSC Ensembl
Cytoband9p23
Allele length
AssemblyAllele length
hg38101369
hg19101369
hg18101369
hg17101369
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv541770
SamplesNINDS_251
Known GenesPTPRD
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv466155
Frequency
Sample Size1557
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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