A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv464607



Internal ID15177986
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr7:80633514..80659538hg38UCSC Ensembl
Innerchr7:80262830..80288854hg19UCSC Ensembl
Innerchr7:80100766..80126790hg18UCSC Ensembl
Innerchr7:79907481..79933505hg17UCSC Ensembl
Cytoband7q21.11
Allele length
AssemblyAllele length
hg3826025
hg1926025
hg1826025
hg1726025
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv540500
SamplesHGDP00632
Known GenesCD36
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv464607
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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