A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv464481



Internal ID15524546
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr7:54216425..54344915hg38UCSC Ensembl
Innerchr7:54284118..54412608hg19UCSC Ensembl
Innerchr7:54251612..54380102hg18UCSC Ensembl
Innerchr7:54058327..54186817hg17UCSC Ensembl
Cytoband7p11.2
Allele length
AssemblyAllele length
hg38128491
hg19128491
hg18128491
hg17128491
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv815n27
Supporting Variantsnssv540396
SamplesHGDP00157
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv464481
Frequency
Sample Size1557
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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