A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv464457



Internal ID15524522
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr7:53399912..53522557hg38UCSC Ensembl
Innerchr7:53467605..53590250hg19UCSC Ensembl
Innerchr7:53435099..53557744hg18UCSC Ensembl
Innerchr7:53241814..53364459hg17UCSC Ensembl
Cytoband7p12.1
Allele length
AssemblyAllele length
hg38122646
hg19122646
hg18122646
hg17122646
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv812n27
Supporting Variantsnssv540372
SamplesHGDP00058
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv464457
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer