A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv464079



Internal ID15524144
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:150515540..150552630hg38UCSC Ensembl
Innerchr6:150836676..150873766hg19UCSC Ensembl
Innerchr6:150878369..150915459hg18UCSC Ensembl
Innerchr6:150928790..150965880hg17UCSC Ensembl
Cytoband6q25.1
Allele length
AssemblyAllele length
hg3837091
hg1937091
hg1837091
hg1737091
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv540067
SamplesHGDP00805
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv464079
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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