A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv464067



Internal ID15524132
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:141892956..141962061hg38UCSC Ensembl
Innerchr6:142214093..142283198hg19UCSC Ensembl
Innerchr6:142255786..142324891hg18UCSC Ensembl
Innerchr6:142255786..142324891hg17UCSC Ensembl
Cytoband6q24.1
Allele length
AssemblyAllele length
hg3869106
hg1969106
hg1869106
hg1769106
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv540056
SamplesHGDP00868
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv464067
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer