A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv463981



Internal ID15524046
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:97680078..97725104hg38UCSC Ensembl
Innerchr6:98127954..98172980hg19UCSC Ensembl
Innerchr6:98234675..98279701hg18UCSC Ensembl
Innerchr6:98234675..98279701hg17UCSC Ensembl
Cytoband6q16.1
Allele length
AssemblyAllele length
hg3845027
hg1945027
hg1845027
hg1745027
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv539991
SamplesHGDP00870
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv463981
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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