A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv462993



Internal ID15523058
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:65926311..66009704hg38UCSC Ensembl
Innerchr6:66636204..66719597hg19UCSC Ensembl
Innerchr6:66692925..66776318hg18UCSC Ensembl
Innerchr6:66692925..66776318hg17UCSC Ensembl
Cytoband6q12
Allele length
AssemblyAllele length
hg3883394
hg1983394
hg1883394
hg1783394
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv539033
SamplesHGDP00562
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv462993
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer