A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv462983



Internal ID15523048
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:65381458..65415830hg38UCSC Ensembl
Innerchr6:66091351..66125723hg19UCSC Ensembl
Innerchr6:66148072..66182444hg18UCSC Ensembl
Innerchr6:66148072..66182444hg17UCSC Ensembl
Cytoband6q12
Allele length
AssemblyAllele length
hg3834373
hg1934373
hg1834373
hg1734373
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv539023
Samples1780862309_A
Known GenesEYS
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv462983
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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