Variant DetailsVariant: nsv462871Internal ID | 15176250 | Landmark | | Location Information | | Cytoband | 6p21.33 | Allele length | Assembly | Allele length | hg38 | 56859 | hg19 | 56859 | hg18 | 56859 | hg17 | 56859 |
| Variant Type | CNV loss | Copy Number | | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | M | Merged Variants | | Supporting Variants | nssv538946 | Samples | NINDS_50 | Known Genes | AIF1, APOM, BAG6, C6orf47, GPANK1, MIR6832, PRRC2A, SNORA38 | Method | SNP array | Analysis | An HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives. | Platform | Not reported | Comments | | Reference | Itsara_et_al_2009 | Pubmed ID | 19166990 | Accession Number(s) | nsv462871
| Frequency | Sample Size | 1557 | Observed Gain | 0 | Observed Loss | 1 | Observed Complex | 0 | Frequency | n/a |
|
|