A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv461336



Internal ID15174715
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr4:38678565..38701308hg38UCSC Ensembl
Innerchr4:38680186..38702929hg19UCSC Ensembl
Innerchr4:38356581..38379324hg18UCSC Ensembl
Innerchr4:38502752..38525495hg17UCSC Ensembl
Cytoband4p14
Allele length
AssemblyAllele length
hg3822744
hg1922744
hg1822744
hg1722744
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv537735
Samples1780862573_A
Known GenesKLF3
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv461336
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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