A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv461321



Internal ID15521386
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr4:33363124..33404711hg38UCSC Ensembl
Innerchr4:33364746..33406333hg19UCSC Ensembl
Innerchr4:33041141..33082728hg18UCSC Ensembl
Innerchr4:33187312..33228899hg17UCSC Ensembl
Cytoband4p15.1
Allele length
AssemblyAllele length
hg3841588
hg1941588
hg1841588
hg1741588
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv537725
SamplesNINDS_125
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv461321
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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