A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv460885



Internal ID15520950
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:147493190..147568125hg38UCSC Ensembl
Innerchr3:147210977..147285912hg19UCSC Ensembl
Innerchr3:148693667..148768602hg18UCSC Ensembl
Innerchr3:148693675..148768610hg17UCSC Ensembl
Cytoband3q24
Allele length
AssemblyAllele length
hg3874936
hg1974936
hg1874936
hg1774936
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv537368
Samples1780854061_A
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nsv460885
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer